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Cluster: AG400_49_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_12594 k141_12594_256 276828 280334 + 1.B.14.6.1
pfam k141_12594 k141_12594_257 280347 282377 + SusD_RagB | SusD-like_3
CAZyme k141_12594 k141_12594_258 282613 285417 + GH2
CAZyme k141_12594 k141_12594_259 285424 287136 + GH29
NULL(UNKNOWN) k141_12594 k141_12594_260 287155 289572 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_12594 k141_12594_261 289710 290609 - HTH_AraC | HTH_AraC
TC k141_12594 k141_12594_262 290763 294089 + 9.A.25.1.1
Gene ID: k141_12594_256
Type: TC
Location: 276828 - 280334 (+)
Gene ID: k141_12594_257
Type: pfam
Location: 280347 - 282377 (+)
Gene ID: k141_12594_258
Type: CAZyme
Location: 282613 - 285417 (+)
Gene ID: k141_12594_259
Type: CAZyme
Location: 285424 - 287136 (+)
Gene ID: k141_12594_260
Type:
Location: 287155 - 289572 (+)
Gene ID: k141_12594_261
Type: TF
Location: 289710 - 290609 (-)
Gene ID: k141_12594_262
Type: TC
Location: 290763 - 294089 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_12594_262 vegetarian > omnivore 1.74214 0.00290
k141_12594_262 vegetarian > vegan 1.34193 0.02197

🧭 Explore Read Mapping of CGC

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