dbCAN Logo

Cluster: AG400_49_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_12594 k141_12594_44 48470 49597 + 9.B.146.1.4
pfam k141_12594 k141_12594_45 49614 50819 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
TC k141_12594 k141_12594_46 50820 52079 + 2.A.66.2.10
CAZyme k141_12594 k141_12594_47 52079 53167 + GT4
pfam k141_12594 k141_12594_48 53174 54217 + EpsG
CAZyme k141_12594 k141_12594_49 54234 55100 + GT2
CAZyme k141_12594 k141_12594_50 55105 56154 + GT4
NULL(UNKNOWN) k141_12594 k141_12594_51 56175 57563 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_12594 k141_12594_52 57560 59152 + PL12_3
CAZyme k141_12594 k141_12594_53 59149 60360 + GT4
pfam k141_12594 k141_12594_54 60357 61517 + Epimerase_2
TC k141_12594 k141_12594_55 61514 63904 + 1.B.18.1.2
Gene ID: k141_12594_44
Type: TC
Location: 48470 - 49597 (+)
Gene ID: k141_12594_45
Type: pfam
Location: 49614 - 50819 (+)
Gene ID: k141_12594_46
Type: TC
Location: 50820 - 52079 (+)
Gene ID: k141_12594_47
Type: CAZyme
Location: 52079 - 53167 (+)
Gene ID: k141_12594_48
Type: pfam
Location: 53174 - 54217 (+)
Gene ID: k141_12594_49
Type: CAZyme
Location: 54234 - 55100 (+)
Gene ID: k141_12594_50
Type: CAZyme
Location: 55105 - 56154 (+)
Gene ID: k141_12594_51
Type:
Location: 56175 - 57563 (+)
Gene ID: k141_12594_52
Type: CAZyme
Location: 57560 - 59152 (+)
Gene ID: k141_12594_53
Type: CAZyme
Location: 59149 - 60360 (+)
Gene ID: k141_12594_54
Type: pfam
Location: 60357 - 61517 (+)
Gene ID: k141_12594_55
Type: TC
Location: 61514 - 63904 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List