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Cluster: AG400_49_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_12175 k141_12175_52 36760 38004 - 2.A.21.9.1
CAZyme k141_12175 k141_12175_53 38057 40357 - GH92
pfam k141_12175 k141_12175_54 40656 42173 + OEP | OEP
pfam k141_12175 k141_12175_55 42406 43833 + NPCBM_assoc
TC k141_12175 k141_12175_56 43906 44625 + 3.A.1.132.11
Gene ID: k141_12175_52
Type: TC
Location: 36760 - 38004 (-)
Gene ID: k141_12175_53
Type: CAZyme
Location: 38057 - 40357 (-)
Gene ID: k141_12175_54
Type: pfam
Location: 40656 - 42173 (+)
Gene ID: k141_12175_55
Type: pfam
Location: 42406 - 43833 (+)
Gene ID: k141_12175_56
Type: TC
Location: 43906 - 44625 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_12175_56 vegetarian > vegan 2.15061 0.01751

🧭 Explore Read Mapping of CGC

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