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Cluster: AG384_bin.28_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_14315 k141_14315_1 174 1118 + 3.A.1.1.10
TC k141_14315 k141_14315_2 1143 2030 + 3.A.1.1.10
pfam k141_14315 k141_14315_3 2086 3633 + SBP_bac_8
CAZyme k141_14315 k141_14315_4 3722 5563 + GH20
CAZyme k141_14315 k141_14315_5 5578 7320 + GH35
TF k141_14315 k141_14315_6 8408 9436 - LacI
CAZyme k141_14315 k141_14315_7 9458 11173 - CBM34 | GH13_20
TC k141_14315 k141_14315_8 11180 12025 - 3.A.1.1.6
TC k141_14315 k141_14315_9 12022 12936 - 3.A.1.1.2
TC k141_14315 k141_14315_10 12933 14147 - 3.A.1.1.16
pfam k141_14315 k141_14315_11 14229 15218 - CBM26 | CBM26 | CBM26
TC k141_14315 k141_14315_12 16339 17937 - 3.A.1.147.6
TC k141_14315 k141_14315_13 17931 18653 - 3.A.1.147.6
Gene ID: k141_14315_1
Type: TC
Location: 174 - 1118 (+)
Gene ID: k141_14315_2
Type: TC
Location: 1143 - 2030 (+)
Gene ID: k141_14315_3
Type: pfam
Location: 2086 - 3633 (+)
Gene ID: k141_14315_4
Type: CAZyme
Location: 3722 - 5563 (+)
Gene ID: k141_14315_5
Type: CAZyme
Location: 5578 - 7320 (+)
Gene ID: k141_14315_6
Type: TF
Location: 8408 - 9436 (-)
Gene ID: k141_14315_7
Type: CAZyme
Location: 9458 - 11173 (-)
Gene ID: k141_14315_8
Type: TC
Location: 11180 - 12025 (-)
Gene ID: k141_14315_9
Type: TC
Location: 12022 - 12936 (-)
Gene ID: k141_14315_10
Type: TC
Location: 12933 - 14147 (-)
Gene ID: k141_14315_11
Type: pfam
Location: 14229 - 15218 (-)
Gene ID: k141_14315_12
Type: TC
Location: 16339 - 17937 (-)
Gene ID: k141_14315_13
Type: TC
Location: 17931 - 18653 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_14315_13 vegetarian > vegan 1.03598 0.00863

🧭 Explore Read Mapping of CGC

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