Genome Details
Selected Rep_genome_ID: AG384_bin.28
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp934621505
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG384_bin.28 | 2,403,047 | 95.97% | 0.27% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_4042 | 2,468,609 | 95.69% | 0.698% | Cameroon | Africa | HRGM |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-E-H_E_17_1727.206 | 2,400,821 | 92.74% | 1.88% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| AG384_bin.28_CGC17 | CGCFAM_00039 | Yes | 3 | 2 | |
| AG384_bin.28_CGC16 | CGCFAM_00127 | Yes | 3 | 1 | |
| AG384_bin.28_CGC8 | CGCFAM_00167 | Yes | 6 | 2 | |
| AG384_bin.28_CGC11 | CGCFAM_00232 | Yes | 4 | 1 | |
| AG384_bin.28_CGC6 | CGCFAM_00245 | Yes | 5 | 1 | |
| AG384_bin.28_CGC2 | CGCFAM_00559 | Yes | 4 | 1 | |
| AG384_bin.28_CGC15 | CGCFAM_00624 | Yes | 3 | 1 | |
| AG384_bin.28_CGC1 | CGCFAM_00768 | Yes | 4 | 1 | |
| AG384_bin.28_CGC12 | CGCFAM_00975 | Yes | 3 | 1 | |
| AG384_bin.28_CGC18 | CGCFAM_00980 | Yes | 3 | 1 | |
| AG384_bin.28_CGC5 | CGCFAM_01281 | Yes | 3 | 1 | |
| AG384_bin.28_CGC21 | CGCFAM_01850 | Yes | 8 | 2 | |
| AG384_bin.28_CGC4 | CGCFAM_02312 | Yes | 3 | 1 | |
| AG384_bin.28_CGC13 | CGCFAM_03176 | Yes | 5 | 1 | |
| AG384_bin.28_CGC7 | CGCFAM_03289 | Yes | 3 | 1 |
Top CAZyme Families