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Cluster: AG352_56_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_6739 k141_6739_13 12267 13655 + 2.A.21.9.2
TF k141_6739 k141_6739_14 13648 14346 + Trans_reg_C
CAZyme k141_6739 k141_6739_15 14443 15027 - CBM13
pfam k141_6739 k141_6739_16 15262 15666 + MGS
CAZyme k141_6739 k141_6739_17 15964 16953 - GT2
NULL(UNKNOWN) k141_6739 k141_6739_18 16969 17442 - NULL(UNKNOWN)
[View Structural Homologs]
TF k141_6739 k141_6739_19 17443 17883 - MarR
TC k141_6739 k141_6739_20 18360 19037 + 3.A.1.3.14
TC k141_6739 k141_6739_21 19050 19796 + 3.A.1.3.24
TC k141_6739 k141_6739_22 19827 20684 + 3.A.1.3.28
Gene ID: k141_6739_13
Type: TC
Location: 12267 - 13655 (+)
Gene ID: k141_6739_14
Type: TF
Location: 13648 - 14346 (+)
Gene ID: k141_6739_15
Type: CAZyme
Location: 14443 - 15027 (-)
Gene ID: k141_6739_16
Type: pfam
Location: 15262 - 15666 (+)
Gene ID: k141_6739_17
Type: CAZyme
Location: 15964 - 16953 (-)
Gene ID: k141_6739_18
Type:
Location: 16969 - 17442 (-)
Gene ID: k141_6739_19
Type: TF
Location: 17443 - 17883 (-)
Gene ID: k141_6739_20
Type: TC
Location: 18360 - 19037 (+)
Gene ID: k141_6739_21
Type: TC
Location: 19050 - 19796 (+)
Gene ID: k141_6739_22
Type: TC
Location: 19827 - 20684 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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