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Cluster: AG352_56_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_133021 k141_133021_1 168 1736 - GH13_44
TF k141_133021 k141_133021_2 1919 2827 - HTH_1
pfam k141_133021 k141_133021_3 3184 4506 + Aminotran_1_2 | Asp_aminotransf
TC k141_133021 k141_133021_4 4916 5602 + 3.A.2.1.5
TC k141_133021 k141_133021_5 5654 5878 + 3.A.2.1.5
pfam k141_133021 k141_133021_6 5896 6387 + ATP-synt_B
TC k141_133021 k141_133021_7 6377 8131 + 3.A.2.1.2
TC k141_133021 k141_133021_8 8118 9005 + 3.A.2.1.5
TC k141_133021 k141_133021_9 9085 10485 + 3.A.2.1.5
pfam k141_133021 k141_133021_10 10485 10892 + ATP-synt_DE | ATP-synt_DE_N
pfam k141_133021 k141_133021_11 11200 11511 + Thioredoxin | Thioredoxin_2 | Thioredoxin_9
CAZyme k141_133021 k141_133021_12 11780 13810 - GH42
TC k141_133021 k141_133021_13 13978 14877 - 3.A.1.1.27
TC k141_133021 k141_133021_14 14874 16319 - 3.A.1.1.27
Gene ID: k141_133021_1
Type: CAZyme
Location: 168 - 1736 (-)
Gene ID: k141_133021_2
Type: TF
Location: 1919 - 2827 (-)
Gene ID: k141_133021_3
Type: pfam
Location: 3184 - 4506 (+)
Gene ID: k141_133021_4
Type: TC
Location: 4916 - 5602 (+)
Gene ID: k141_133021_5
Type: TC
Location: 5654 - 5878 (+)
Gene ID: k141_133021_6
Type: pfam
Location: 5896 - 6387 (+)
Gene ID: k141_133021_7
Type: TC
Location: 6377 - 8131 (+)
Gene ID: k141_133021_8
Type: TC
Location: 8118 - 9005 (+)
Gene ID: k141_133021_9
Type: TC
Location: 9085 - 10485 (+)
Gene ID: k141_133021_10
Type: pfam
Location: 10485 - 10892 (+)
Gene ID: k141_133021_11
Type: pfam
Location: 11200 - 11511 (+)
Gene ID: k141_133021_12
Type: CAZyme
Location: 11780 - 13810 (-)
Gene ID: k141_133021_13
Type: TC
Location: 13978 - 14877 (-)
Gene ID: k141_133021_14
Type: TC
Location: 14874 - 16319 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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