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Cluster: AG352_56_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_214256 k141_214256_14 12296 13240 - GT100
TC k141_214256 k141_214256_15 13233 14537 - 3.A.1.103.5
TC k141_214256 k141_214256_16 14550 15431 - 3.A.1.103.4
pfam k141_214256 k141_214256_17 15607 16632 - Acyl_transf_3
pfam k141_214256 k141_214256_18 16658 16831 - FeoB_associated
TC k141_214256 k141_214256_19 16888 19272 - 9.A.8.1.6
TC k141_214256 k141_214256_20 19946 20806 + 3.A.1.3.27
TC k141_214256 k141_214256_21 20924 21697 + 3.A.1.3.17
TC k141_214256 k141_214256_22 21684 22400 + 3.A.1.3.25
TC k141_214256 k141_214256_23 22849 24906 - 3.A.24.3.1
Gene ID: k141_214256_14
Type: CAZyme
Location: 12296 - 13240 (-)
Gene ID: k141_214256_15
Type: TC
Location: 13233 - 14537 (-)
Gene ID: k141_214256_16
Type: TC
Location: 14550 - 15431 (-)
Gene ID: k141_214256_17
Type: pfam
Location: 15607 - 16632 (-)
Gene ID: k141_214256_18
Type: pfam
Location: 16658 - 16831 (-)
Gene ID: k141_214256_19
Type: TC
Location: 16888 - 19272 (-)
Gene ID: k141_214256_20
Type: TC
Location: 19946 - 20806 (+)
Gene ID: k141_214256_21
Type: TC
Location: 20924 - 21697 (+)
Gene ID: k141_214256_22
Type: TC
Location: 21684 - 22400 (+)
Gene ID: k141_214256_23
Type: TC
Location: 22849 - 24906 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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