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Cluster: AG352_56_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_138880 k141_138880_14 13826 15394 - 4.A.2.1.17
pfam k141_138880 k141_138880_15 15432 16631 - Patatin
pfam k141_138880 k141_138880_16 16935 17870 + NTP_transferase
TC k141_138880 k141_138880_17 18326 19612 - 3.A.1.1.11
CAZyme k141_138880 k141_138880_18 20344 21675 - GH28
pfam k141_138880 k141_138880_19 22018 22806 - Polysacc_deac_1
CAZyme k141_138880 k141_138880_20 22834 24273 - GH63
CAZyme k141_138880 k141_138880_21 24280 25827 - CBM91 | GH43_11
TC k141_138880 k141_138880_22 25835 26677 - 3.A.1.1.11
TC k141_138880 k141_138880_23 26699 27610 - 3.A.1.1.11
STP k141_138880 k141_138880_24 27699 29081 - SBP_bac_1
TF k141_138880 k141_138880_25 29380 30291 + HTH_AraC | HTH_AraC
TC k141_138880 k141_138880_26 30332 30940 - 9.B.28.1.8
TF k141_138880 k141_138880_27 31301 31804 + HTH_3
TC k141_138880 k141_138880_28 31979 33280 - 2.A.56.1.5
pfam k141_138880 k141_138880_29 33296 33787 - DctQ
TC k141_138880 k141_138880_30 33791 34825 - 2.A.56.1.2
CAZyme k141_138880 k141_138880_31 34867 37392 - GH31_2
Gene ID: k141_138880_14
Type: TC
Location: 13826 - 15394 (-)
Gene ID: k141_138880_15
Type: pfam
Location: 15432 - 16631 (-)
Gene ID: k141_138880_16
Type: pfam
Location: 16935 - 17870 (+)
Gene ID: k141_138880_17
Type: TC
Location: 18326 - 19612 (-)
Gene ID: k141_138880_18
Type: CAZyme
Location: 20344 - 21675 (-)
Gene ID: k141_138880_19
Type: pfam
Location: 22018 - 22806 (-)
Gene ID: k141_138880_20
Type: CAZyme
Location: 22834 - 24273 (-)
Gene ID: k141_138880_21
Type: CAZyme
Location: 24280 - 25827 (-)
Gene ID: k141_138880_22
Type: TC
Location: 25835 - 26677 (-)
Gene ID: k141_138880_23
Type: TC
Location: 26699 - 27610 (-)
Gene ID: k141_138880_24
Type: STP
Location: 27699 - 29081 (-)
Gene ID: k141_138880_25
Type: TF
Location: 29380 - 30291 (+)
Gene ID: k141_138880_26
Type: TC
Location: 30332 - 30940 (-)
Gene ID: k141_138880_27
Type: TF
Location: 31301 - 31804 (+)
Gene ID: k141_138880_28
Type: TC
Location: 31979 - 33280 (-)
Gene ID: k141_138880_29
Type: pfam
Location: 33296 - 33787 (-)
Gene ID: k141_138880_30
Type: TC
Location: 33791 - 34825 (-)
Gene ID: k141_138880_31
Type: CAZyme
Location: 34867 - 37392 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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