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Cluster: AG278_bin.42_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_180522 k141_180522_2 659 3271 + 3.A.3.5.15
TF k141_180522 k141_180522_3 3510 4616 + HTH_11
pfam k141_180522 k141_180522_4 4925 5953 + ADH_zinc_N | ADH_N | ADH_zinc_N_2
TC k141_180522 k141_180522_5 6072 7436 + 2.A.2.3.1
STP k141_180522 k141_180522_6 7420 8379 + PfkB
CAZyme k141_180522 k141_180522_7 8450 9466 + GH5_2
NULL(UNKNOWN) k141_180522 k141_180522_8 9541 10113 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_180522 k141_180522_9 10157 11023 - HTH_AraC | HTH_AraC
CAZyme k141_180522 k141_180522_10 11202 14240 + GH2
TC k141_180522 k141_180522_11 14293 15696 + 2.A.2.3.3
Gene ID: k141_180522_2
Type: TC
Location: 659 - 3271 (+)
Gene ID: k141_180522_3
Type: TF
Location: 3510 - 4616 (+)
Gene ID: k141_180522_4
Type: pfam
Location: 4925 - 5953 (+)
Gene ID: k141_180522_5
Type: TC
Location: 6072 - 7436 (+)
Gene ID: k141_180522_6
Type: STP
Location: 7420 - 8379 (+)
Gene ID: k141_180522_7
Type: CAZyme
Location: 8450 - 9466 (+)
Gene ID: k141_180522_8
Type:
Location: 9541 - 10113 (+)
Gene ID: k141_180522_9
Type: TF
Location: 10157 - 11023 (-)
Gene ID: k141_180522_10
Type: CAZyme
Location: 11202 - 14240 (+)
Gene ID: k141_180522_11
Type: TC
Location: 14293 - 15696 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_180522_5 vegan > omnivore 1.44911 0.00141

🧭 Explore Read Mapping of CGC

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