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Cluster: AG252_6_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_44351 k141_44351_99 100962 102374 + GH4
NULL(UNKNOWN) k141_44351 k141_44351_100 102568 103662 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_44351 k141_44351_101 103769 105700 + HTH_8
TC k141_44351 k141_44351_102 106048 107325 + 2.A.56.1.6
TC k141_44351 k141_44351_103 107345 108373 + 2.A.56.1.9
pfam k141_44351 k141_44351_104 108392 109075 + Cyclase
pfam k141_44351 k141_44351_105 109087 109596 + DctQ
TC k141_44351 k141_44351_106 109737 111602 - 1.C.105.2.8
Gene ID: k141_44351_99
Type: CAZyme
Location: 100962 - 102374 (+)
Gene ID: k141_44351_100
Type:
Location: 102568 - 103662 (+)
Gene ID: k141_44351_101
Type: TF
Location: 103769 - 105700 (+)
Gene ID: k141_44351_102
Type: TC
Location: 106048 - 107325 (+)
Gene ID: k141_44351_103
Type: TC
Location: 107345 - 108373 (+)
Gene ID: k141_44351_104
Type: pfam
Location: 108392 - 109075 (+)
Gene ID: k141_44351_105
Type: pfam
Location: 109087 - 109596 (+)
Gene ID: k141_44351_106
Type: TC
Location: 109737 - 111602 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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