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Cluster: AG252_6_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_16017 k141_16017_325 373353 374459 + 3.A.1.2.13
TC k141_16017 k141_16017_326 374520 376001 + 3.A.1.2.13
TC k141_16017 k141_16017_327 376009 376971 + 3.A.1.2.13
CAZyme k141_16017 k141_16017_328 376983 378017 + GH179
pfam k141_16017 k141_16017_329 378028 378942 + AP_endonuc_2
STP k141_16017 k141_16017_330 379276 381813 + Pyr_redox_2
TC k141_16017 k141_16017_331 381925 383280 - 2.A.40.3.2
TF k141_16017 k141_16017_332 383759 384733 + LacI
CAZyme k141_16017 k141_16017_333 384965 386623 + GH32
TC k141_16017 k141_16017_334 386641 387906 + 3.A.1.1.20
TC k141_16017 k141_16017_335 387997 388884 + 3.A.1.1.20
TC k141_16017 k141_16017_336 388900 389742 + 3.A.1.1.20
Gene ID: k141_16017_325
Type: TC
Location: 373353 - 374459 (+)
Gene ID: k141_16017_326
Type: TC
Location: 374520 - 376001 (+)
Gene ID: k141_16017_327
Type: TC
Location: 376009 - 376971 (+)
Gene ID: k141_16017_328
Type: CAZyme
Location: 376983 - 378017 (+)
Gene ID: k141_16017_329
Type: pfam
Location: 378028 - 378942 (+)
Gene ID: k141_16017_330
Type: STP
Location: 379276 - 381813 (+)
Gene ID: k141_16017_331
Type: TC
Location: 381925 - 383280 (-)
Gene ID: k141_16017_332
Type: TF
Location: 383759 - 384733 (+)
Gene ID: k141_16017_333
Type: CAZyme
Location: 384965 - 386623 (+)
Gene ID: k141_16017_334
Type: TC
Location: 386641 - 387906 (+)
Gene ID: k141_16017_335
Type: TC
Location: 387997 - 388884 (+)
Gene ID: k141_16017_336
Type: TC
Location: 388900 - 389742 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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