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Cluster: AG252_6_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_16451 k141_16451_427 469540 470817 + 2.A.6.2.41
TC k141_16451 k141_16451_428 470821 473826 + 2.A.6.3.6
pfam k141_16451 k141_16451_429 473845 475005 + OEP
NULL(UNKNOWN) k141_16451 k141_16451_430 475082 476359 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_16451 k141_16451_431 476346 478223 - 8.A.59.2.1
TF k141_16451 k141_16451_432 478220 479776 - HTH_AraC | HTH_AraC
TC k141_16451 k141_16451_433 479938 480966 + 3.A.1.2.9
STP k141_16451 k141_16451_434 481177 481404 + PTS-HPr
TF k141_16451 k141_16451_435 481513 482172 - GntR
CAZyme k141_16451 k141_16451_436 482451 483851 + GH4
TC k141_16451 k141_16451_437 483869 484765 + 3.A.1.1.11
TC k141_16451 k141_16451_438 484770 485618 + 3.A.1.1.11
TC k141_16451 k141_16451_439 485654 487072 + 3.A.1.1.11
Gene ID: k141_16451_427
Type: TC
Location: 469540 - 470817 (+)
Gene ID: k141_16451_428
Type: TC
Location: 470821 - 473826 (+)
Gene ID: k141_16451_429
Type: pfam
Location: 473845 - 475005 (+)
Gene ID: k141_16451_430
Type:
Location: 475082 - 476359 (+)
Gene ID: k141_16451_431
Type: TC
Location: 476346 - 478223 (-)
Gene ID: k141_16451_432
Type: TF
Location: 478220 - 479776 (-)
Gene ID: k141_16451_433
Type: TC
Location: 479938 - 480966 (+)
Gene ID: k141_16451_434
Type: STP
Location: 481177 - 481404 (+)
Gene ID: k141_16451_435
Type: TF
Location: 481513 - 482172 (-)
Gene ID: k141_16451_436
Type: CAZyme
Location: 482451 - 483851 (+)
Gene ID: k141_16451_437
Type: TC
Location: 483869 - 484765 (+)
Gene ID: k141_16451_438
Type: TC
Location: 484770 - 485618 (+)
Gene ID: k141_16451_439
Type: TC
Location: 485654 - 487072 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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