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Cluster: AG148_bin.48_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_125843 k141_125843_55 53401 56982 + 3.A.1.122.2
pfam k141_125843 k141_125843_56 57082 58026 + Mem_trans
CAZyme k141_125843 k141_125843_57 58336 63540 + CBM51
TC k141_125843 k141_125843_58 63749 65491 + 8.A.59.2.1
TF k141_125843 k141_125843_59 65502 66959 + HTH_AraC
STP k141_125843 k141_125843_60 67052 68323 + SBP_bac_1
TC k141_125843 k141_125843_61 68417 69286 + 3.A.1.1.20
TC k141_125843 k141_125843_62 69283 70107 + 3.A.1.1.34
CAZyme k141_125843 k141_125843_63 70155 72383 + GH36
CAZyme k141_125843 k141_125843_64 72461 74467 - GH31_1
Gene ID: k141_125843_55
Type: TC
Location: 53401 - 56982 (+)
Gene ID: k141_125843_56
Type: pfam
Location: 57082 - 58026 (+)
Gene ID: k141_125843_57
Type: CAZyme
Location: 58336 - 63540 (+)
Gene ID: k141_125843_58
Type: TC
Location: 63749 - 65491 (+)
Gene ID: k141_125843_59
Type: TF
Location: 65502 - 66959 (+)
Gene ID: k141_125843_60
Type: STP
Location: 67052 - 68323 (+)
Gene ID: k141_125843_61
Type: TC
Location: 68417 - 69286 (+)
Gene ID: k141_125843_62
Type: TC
Location: 69283 - 70107 (+)
Gene ID: k141_125843_63
Type: CAZyme
Location: 70155 - 72383 (+)
Gene ID: k141_125843_64
Type: CAZyme
Location: 72461 - 74467 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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