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Cluster: AG116_bin.36_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_329010 k141_329010_16 13160 15064 - GH20
TC k141_329010 k141_329010_17 15372 18017 + 3.A.3.2.21
pfam k141_329010 k141_329010_18 18079 18594 - Flg_new
CAZyme k141_329010 k141_329010_19 18604 19833 - GH37
NULL(UNKNOWN) k141_329010 k141_329010_20 19833 21788 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_329010 k141_329010_21 21782 23041 - GH109
CAZyme k141_329010 k141_329010_22 23051 25552 - GH106
TC k141_329010 k141_329010_23 25560 26459 - 3.A.1.1.44
TC k141_329010 k141_329010_24 26461 27384 - 3.A.1.1.18
STP k141_329010 k141_329010_25 27430 28767 - SBP_bac_1
CAZyme k141_329010 k141_329010_26 28787 34093 - CBM67
Gene ID: k141_329010_16
Type: CAZyme
Location: 13160 - 15064 (-)
Gene ID: k141_329010_17
Type: TC
Location: 15372 - 18017 (+)
Gene ID: k141_329010_18
Type: pfam
Location: 18079 - 18594 (-)
Gene ID: k141_329010_19
Type: CAZyme
Location: 18604 - 19833 (-)
Gene ID: k141_329010_20
Type:
Location: 19833 - 21788 (-)
Gene ID: k141_329010_21
Type: CAZyme
Location: 21782 - 23041 (-)
Gene ID: k141_329010_22
Type: CAZyme
Location: 23051 - 25552 (-)
Gene ID: k141_329010_23
Type: TC
Location: 25560 - 26459 (-)
Gene ID: k141_329010_24
Type: TC
Location: 26461 - 27384 (-)
Gene ID: k141_329010_25
Type: STP
Location: 27430 - 28767 (-)
Gene ID: k141_329010_26
Type: CAZyme
Location: 28787 - 34093 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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