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Cluster: AG093_52_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_312714 k141_312714_45 60344 63079 + GH13_14
TC k141_312714 k141_312714_46 63114 64295 + 3.A.1.1.6
TC k141_312714 k141_312714_47 64383 66599 + 3.A.1.1.6
TC k141_312714 k141_312714_48 66602 67981 + 3.A.1.1.6
CAZyme k141_312714 k141_312714_49 68361 70136 + GH13_36
STP k141_312714 k141_312714_50 70227 72059 + SBP_bac_5
TC k141_312714 k141_312714_51 72756 73853 + 3.A.1.5.20
TC k141_312714 k141_312714_52 73871 75955 + 3.A.1.5.15
TC k141_312714 k141_312714_53 76175 77296 + 3.A.1.1.22
pfam k141_312714 k141_312714_54 77375 79276 - RNB | RNB | HTH_RNase_II
TC k141_312714 k141_312714_55 79779 80525 + 1.A.34.1.1
Gene ID: k141_312714_45
Type: CAZyme
Location: 60344 - 63079 (+)
Gene ID: k141_312714_46
Type: TC
Location: 63114 - 64295 (+)
Gene ID: k141_312714_47
Type: TC
Location: 64383 - 66599 (+)
Gene ID: k141_312714_48
Type: TC
Location: 66602 - 67981 (+)
Gene ID: k141_312714_49
Type: CAZyme
Location: 68361 - 70136 (+)
Gene ID: k141_312714_50
Type: STP
Location: 70227 - 72059 (+)
Gene ID: k141_312714_51
Type: TC
Location: 72756 - 73853 (+)
Gene ID: k141_312714_52
Type: TC
Location: 73871 - 75955 (+)
Gene ID: k141_312714_53
Type: TC
Location: 76175 - 77296 (+)
Gene ID: k141_312714_54
Type: pfam
Location: 77375 - 79276 (-)
Gene ID: k141_312714_55
Type: TC
Location: 79779 - 80525 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Spirochaetota
→
Class
Spirochaetia
→
Order
Treponematales
→
Family
Treponemataceae
→
Genus
Treponema_D
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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