Cluster: AG093_52_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: AG093_52
- CGC Family ID: CGCFAM_01145
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_241950 | k141_241950_152 | 163829 | 165025 | + | GT28 |
| pfam | k141_241950 | k141_241950_153 | 165022 | 165510 | + | Colicin_V |
| pfam | k141_241950 | k141_241950_154 | 165503 | 166732 | + | DNA_pol3_delta2 | DNA_pol3_delta2 |
| TC | k141_241950 | k141_241950_155 | 166717 | 167970 | + | 2.A.21.9.1 |
Gene ID: k141_241950_152
Type: CAZyme
Location: 163829 - 165025 (+)
Type: CAZyme
Location: 163829 - 165025 (+)
Gene ID: k141_241950_153
Type: pfam
Location: 165022 - 165510 (+)
Type: pfam
Location: 165022 - 165510 (+)
Gene ID: k141_241950_154
Type: pfam
Location: 165503 - 166732 (+)
Type: pfam
Location: 165503 - 166732 (+)
Gene ID: k141_241950_155
Type: TC
Location: 166717 - 167970 (+)
Type: TC
Location: 166717 - 167970 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.