Cluster: AG093_52_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: AG093_52
- CGC Family ID: CGCFAM_00002
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_212373 | k141_212373_14 | 11184 | 12662 | + | 2.A.66.5.2 |
| CAZyme | k141_212373 | k141_212373_15 | 12695 | 13600 | + | GT32 |
| pfam | k141_212373 | k141_212373_16 | 13590 | 14462 | + | LicD |
| CAZyme | k141_212373 | k141_212373_17 | 14518 | 16344 | + | GT2 | GT32 |
Gene ID: k141_212373_14
Type: TC
Location: 11184 - 12662 (+)
Type: TC
Location: 11184 - 12662 (+)
Gene ID: k141_212373_15
Type: CAZyme
Location: 12695 - 13600 (+)
Type: CAZyme
Location: 12695 - 13600 (+)
Gene ID: k141_212373_16
Type: pfam
Location: 13590 - 14462 (+)
Type: pfam
Location: 13590 - 14462 (+)
Gene ID: k141_212373_17
Type: CAZyme
Location: 14518 - 16344 (+)
Type: CAZyme
Location: 14518 - 16344 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.