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Cluster: AG093_52_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_157403 k141_157403_26 18396 19931 - 2.A.21.2.6
TC k141_157403 k141_157403_27 20243 21853 + 3.A.1.105.12
CAZyme k141_157403 k141_157403_28 21910 22962 + GH18
STP k141_157403 k141_157403_29 23034 23942 - PfkB
TC k141_157403 k141_157403_30 24690 25634 + 3.A.1.4.10
TC k141_157403 k141_157403_31 25650 26678 + 3.A.1.4.8
TC k141_157403 k141_157403_32 26678 27469 + 3.A.1.4.10
TC k141_157403 k141_157403_33 27471 28178 + 3.A.1.4.10
CAZyme k141_157403 k141_157403_34 28278 29780 + GH32
pfam k141_157403 k141_157403_35 29824 32175 - Asparaginase | GatB_Yqey | GatB_N
CAZyme k141_157403 k141_157403_36 32587 34017 + GH142
Gene ID: k141_157403_26
Type: TC
Location: 18396 - 19931 (-)
Gene ID: k141_157403_27
Type: TC
Location: 20243 - 21853 (+)
Gene ID: k141_157403_28
Type: CAZyme
Location: 21910 - 22962 (+)
Gene ID: k141_157403_29
Type: STP
Location: 23034 - 23942 (-)
Gene ID: k141_157403_30
Type: TC
Location: 24690 - 25634 (+)
Gene ID: k141_157403_31
Type: TC
Location: 25650 - 26678 (+)
Gene ID: k141_157403_32
Type: TC
Location: 26678 - 27469 (+)
Gene ID: k141_157403_33
Type: TC
Location: 27471 - 28178 (+)
Gene ID: k141_157403_34
Type: CAZyme
Location: 28278 - 29780 (+)
Gene ID: k141_157403_35
Type: pfam
Location: 29824 - 32175 (-)
Gene ID: k141_157403_36
Type: CAZyme
Location: 32587 - 34017 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Spirochaetota
→
Class
Spirochaetia
→
Order
Treponematales
→
Family
Treponemataceae
→
Genus
Treponema_D
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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