Cluster: AG093_52_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: AG093_52
- CGC Family ID: CGCFAM_04574
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_241950 | k141_241950_32 | 35013 | 37094 | + | 3.B.1.1.6 |
| TC | k141_241950 | k141_241950_33 | 37155 | 38582 | + | 3.B.1.1.1 |
| pfam | k141_241950 | k141_241950_34 | 38744 | 39379 | - | LUD_dom |
| pfam | k141_241950 | k141_241950_35 | 39570 | 40901 | - | OmpA |
| CAZyme | k141_241950 | k141_241950_36 | 40986 | 41948 | - | GH23 |
Gene ID: k141_241950_32
Type: TC
Location: 35013 - 37094 (+)
Type: TC
Location: 35013 - 37094 (+)
Gene ID: k141_241950_33
Type: TC
Location: 37155 - 38582 (+)
Type: TC
Location: 37155 - 38582 (+)
Gene ID: k141_241950_34
Type: pfam
Location: 38744 - 39379 (-)
Type: pfam
Location: 38744 - 39379 (-)
Gene ID: k141_241950_35
Type: pfam
Location: 39570 - 40901 (-)
Type: pfam
Location: 39570 - 40901 (-)
Gene ID: k141_241950_36
Type: CAZyme
Location: 40986 - 41948 (-)
Type: CAZyme
Location: 40986 - 41948 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.