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Cluster: AG084_42_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_180730 k141_180730_3 1945 5328 + 1.B.14.6.1
pfam k141_180730 k141_180730_4 5380 7092 + SusD_RagB | SusD-like_2 | SusD-like_3
pfam k141_180730 k141_180730_5 7301 8881 + PDDEXK_9 | AAA-ATPase_like
TC k141_180730 k141_180730_6 9060 10004 + 2.A.115.1.1
NULL(UNKNOWN) k141_180730 k141_180730_7 10051 11181 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_180730 k141_180730_8 11375 14545 + Cleaved_Adhesin
TC k141_180730 k141_180730_9 14913 17288 + 1.B.14.14.1
TC k141_180730 k141_180730_10 17463 18053 + 4.B.1.1.4
CAZyme k141_180730 k141_180730_11 18265 19422 + CE9
Gene ID: k141_180730_3
Type: TC
Location: 1945 - 5328 (+)
Gene ID: k141_180730_4
Type: pfam
Location: 5380 - 7092 (+)
Gene ID: k141_180730_5
Type: pfam
Location: 7301 - 8881 (+)
Gene ID: k141_180730_6
Type: TC
Location: 9060 - 10004 (+)
Gene ID: k141_180730_7
Type:
Location: 10051 - 11181 (-)
Gene ID: k141_180730_8
Type: pfam
Location: 11375 - 14545 (+)
Gene ID: k141_180730_9
Type: TC
Location: 14913 - 17288 (+)
Gene ID: k141_180730_10
Type: TC
Location: 17463 - 18053 (+)
Gene ID: k141_180730_11
Type: CAZyme
Location: 18265 - 19422 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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