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Cluster: AG078_28_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_108630 k141_108630_6 4937 5275 - 4.A.3.1.2
TF k141_108630 k141_108630_7 5490 6494 - LacI
TC k141_108630 k141_108630_8 6852 8627 + 4.A.3.1.1
CAZyme k141_108630 k141_108630_9 8694 10133 + GH1
TF k141_108630 k141_108630_10 10395 11432 - LacI
CAZyme k141_108630 k141_108630_11 11774 13216 + GH1
TC k141_108630 k141_108630_12 13393 15153 + 4.A.3.1.1
TF k141_108630 k141_108630_13 15330 16331 - LacI
TC k141_108630 k141_108630_14 16616 18373 + 4.A.3.1.1
CAZyme k141_108630 k141_108630_15 18449 19870 + GH1
Gene ID: k141_108630_6
Type: TC
Location: 4937 - 5275 (-)
Gene ID: k141_108630_7
Type: TF
Location: 5490 - 6494 (-)
Gene ID: k141_108630_8
Type: TC
Location: 6852 - 8627 (+)
Gene ID: k141_108630_9
Type: CAZyme
Location: 8694 - 10133 (+)
Gene ID: k141_108630_10
Type: TF
Location: 10395 - 11432 (-)
Gene ID: k141_108630_11
Type: CAZyme
Location: 11774 - 13216 (+)
Gene ID: k141_108630_12
Type: TC
Location: 13393 - 15153 (+)
Gene ID: k141_108630_13
Type: TF
Location: 15330 - 16331 (-)
Gene ID: k141_108630_14
Type: TC
Location: 16616 - 18373 (+)
Gene ID: k141_108630_15
Type: CAZyme
Location: 18449 - 19870 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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