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Cluster: AG078_26_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_88713 k141_88713_14 18616 21927 - 1.B.14.6.2
TC k141_88713 k141_88713_15 22274 23692 - 2.A.25.1.5
pfam k141_88713 k141_88713_16 23923 25656 - PDDEXK_9 | AAA-ATPase_like
pfam k141_88713 k141_88713_17 26186 26965 - DUF4294
CAZyme k141_88713 k141_88713_18 27189 28307 - GT4
pfam k141_88713 k141_88713_19 28650 29576 + LicD
CAZyme k141_88713 k141_88713_20 29685 30692 - GT2
pfam k141_88713 k141_88713_21 30699 31394 - Glycos_transf_2 | Glyco_transf_7C
CAZyme k141_88713 k141_88713_22 31784 32830 - GT113
pfam k141_88713 k141_88713_23 32840 33592 - Kdo
pfam k141_88713 k141_88713_24 33570 34541 - Lip_A_acyltrans
TC k141_88713 k141_88713_25 34566 36386 - 3.A.1.106.1
Gene ID: k141_88713_14
Type: TC
Location: 18616 - 21927 (-)
Gene ID: k141_88713_15
Type: TC
Location: 22274 - 23692 (-)
Gene ID: k141_88713_16
Type: pfam
Location: 23923 - 25656 (-)
Gene ID: k141_88713_17
Type: pfam
Location: 26186 - 26965 (-)
Gene ID: k141_88713_18
Type: CAZyme
Location: 27189 - 28307 (-)
Gene ID: k141_88713_19
Type: pfam
Location: 28650 - 29576 (+)
Gene ID: k141_88713_20
Type: CAZyme
Location: 29685 - 30692 (-)
Gene ID: k141_88713_21
Type: pfam
Location: 30699 - 31394 (-)
Gene ID: k141_88713_22
Type: CAZyme
Location: 31784 - 32830 (-)
Gene ID: k141_88713_23
Type: pfam
Location: 32840 - 33592 (-)
Gene ID: k141_88713_24
Type: pfam
Location: 33570 - 34541 (-)
Gene ID: k141_88713_25
Type: TC
Location: 34566 - 36386 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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