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Cluster: AG078_26_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_181555 k141_181555_38 47285 47635 + 3.D.1.8.1
TC k141_181555 k141_181555_39 47626 48441 + 3.D.1.6.1
TC k141_181555 k141_181555_40 48457 50034 + 3.D.1.5.1
TC k141_181555 k141_181555_41 50157 51242 + 3.D.1.5.1
STP k141_181555 k141_181555_42 51255 51824 + Fer4 | Fer4
TC k141_181555 k141_181555_43 51830 52351 + 3.D.9.1.1
TC k141_181555 k141_181555_44 52348 52656 + 3.D.9.1.1
TC k141_181555 k141_181555_45 52664 54625 + 3.D.9.1.1
TC k141_181555 k141_181555_46 54662 56185 + 3.D.1.5.1
TC k141_181555 k141_181555_47 56212 57684 + 3.D.1.2.1
pfam k141_181555 k141_181555_48 57978 58631 + Ribul_P_3_epim
STP k141_181555 k141_181555_49 58767 59363 - Sigma70_r2 | Sigma70_r4_2
CAZyme k141_181555 k141_181555_50 59602 60702 - CE2
TC k141_181555 k141_181555_51 60819 63494 - 1.B.14.6.14
Gene ID: k141_181555_38
Type: TC
Location: 47285 - 47635 (+)
Gene ID: k141_181555_39
Type: TC
Location: 47626 - 48441 (+)
Gene ID: k141_181555_40
Type: TC
Location: 48457 - 50034 (+)
Gene ID: k141_181555_41
Type: TC
Location: 50157 - 51242 (+)
Gene ID: k141_181555_42
Type: STP
Location: 51255 - 51824 (+)
Gene ID: k141_181555_43
Type: TC
Location: 51830 - 52351 (+)
Gene ID: k141_181555_44
Type: TC
Location: 52348 - 52656 (+)
Gene ID: k141_181555_45
Type: TC
Location: 52664 - 54625 (+)
Gene ID: k141_181555_46
Type: TC
Location: 54662 - 56185 (+)
Gene ID: k141_181555_47
Type: TC
Location: 56212 - 57684 (+)
Gene ID: k141_181555_48
Type: pfam
Location: 57978 - 58631 (+)
Gene ID: k141_181555_49
Type: STP
Location: 58767 - 59363 (-)
Gene ID: k141_181555_50
Type: CAZyme
Location: 59602 - 60702 (-)
Gene ID: k141_181555_51
Type: TC
Location: 60819 - 63494 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_181555_46 omnivore > vegetarian 1.37196 0.03327

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