Cluster: AG053_bin.25_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: AG053_bin.25
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_15554 | k141_15554_7 | 8258 | 9658 | + | GH1 |
| TC | k141_15554 | k141_15554_8 | 9779 | 11131 | + | 4.A.3.2.2 |
| TC | k141_15554 | k141_15554_9 | 11286 | 11588 | + | 4.A.3.2.9 |
| TC | k141_15554 | k141_15554_10 | 11598 | 11930 | + | 4.A.3.2.3 |
| STP | k141_15554 | k141_15554_11 | 12171 | 13124 | + | Glucokinase |
| pfam | k141_15554 | k141_15554_12 | 13251 | 14174 | + | DHH | DHHA2 |
| TC | k141_15554 | k141_15554_13 | 14442 | 15800 | + | 2.A.33.1.1 |
Gene ID: k141_15554_7
Type: CAZyme
Location: 8258 - 9658 (+)
Type: CAZyme
Location: 8258 - 9658 (+)
Gene ID: k141_15554_8
Type: TC
Location: 9779 - 11131 (+)
Type: TC
Location: 9779 - 11131 (+)
Gene ID: k141_15554_9
Type: TC
Location: 11286 - 11588 (+)
Type: TC
Location: 11286 - 11588 (+)
Gene ID: k141_15554_10
Type: TC
Location: 11598 - 11930 (+)
Type: TC
Location: 11598 - 11930 (+)
Gene ID: k141_15554_11
Type: STP
Location: 12171 - 13124 (+)
Type: STP
Location: 12171 - 13124 (+)
Gene ID: k141_15554_12
Type: pfam
Location: 13251 - 14174 (+)
Type: pfam
Location: 13251 - 14174 (+)
Gene ID: k141_15554_13
Type: TC
Location: 14442 - 15800 (+)
Type: TC
Location: 14442 - 15800 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.