Genome Details
Selected Rep_genome_ID: AG053_bin.25
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG053_bin.25 | 2,079,606 | 94.89% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| AG053_bin.25_CGC6 | CGCFAM_00008 | Yes | 3 | 1 | |
| AG053_bin.25_CGC9 | CGCFAM_00010 | Yes | 5 | 2 | alpha-glucan |
| AG053_bin.25_CGC13 | CGCFAM_00014 | Yes | 5 | 2 | host glycan |
| AG053_bin.25_CGC15 | CGCFAM_00019 | Yes | 4 | 1 | |
| AG053_bin.25_CGC4 | CGCFAM_00042 | Yes | 4 | 1 | beta-glucan |
| AG053_bin.25_CGC1 | CGCFAM_00389 | Yes | 4 | 2 | |
| AG053_bin.25_CGC7 | CGCFAM_04522 | Yes | 3 | 1 |
Top CAZyme Families