Cluster: AG040_bin.65_CGC10
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: AG040_bin.65
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_43366 | k141_43366_43 | 57679 | 58923 | - | GT4 |
| pfam | k141_43366 | k141_43366_44 | 58940 | 59704 | - | BcrAD_BadFG |
| pfam | k141_43366 | k141_43366_45 | 59756 | 60919 | - | HGD-D |
| TC | k141_43366 | k141_43366_46 | 60997 | 61782 | - | 3.A.1.5.36 |
| TC | k141_43366 | k141_43366_47 | 61769 | 62767 | - | 3.A.1.5.35 |
| TC | k141_43366 | k141_43366_48 | 62771 | 63598 | - | 3.A.1.5.39 |
| TC | k141_43366 | k141_43366_49 | 63598 | 64551 | - | 3.A.1.5.11 |
| TC | k141_43366 | k141_43366_50 | 64638 | 66248 | - | 3.A.1.5.11 |
| pfam | k141_43366 | k141_43366_51 | 66433 | 67716 | - | HGD-D |
| TC | k141_43366 | k141_43366_52 | 68167 | 69237 | - | 3.A.1.1.3 |
| TC | k141_43366 | k141_43366_53 | 69241 | 70722 | - | 3.A.1.8.1 |
Gene ID: k141_43366_43
Type: CAZyme
Location: 57679 - 58923 (-)
Type: CAZyme
Location: 57679 - 58923 (-)
Gene ID: k141_43366_44
Type: pfam
Location: 58940 - 59704 (-)
Type: pfam
Location: 58940 - 59704 (-)
Gene ID: k141_43366_45
Type: pfam
Location: 59756 - 60919 (-)
Type: pfam
Location: 59756 - 60919 (-)
Gene ID: k141_43366_46
Type: TC
Location: 60997 - 61782 (-)
Type: TC
Location: 60997 - 61782 (-)
Gene ID: k141_43366_47
Type: TC
Location: 61769 - 62767 (-)
Type: TC
Location: 61769 - 62767 (-)
Gene ID: k141_43366_48
Type: TC
Location: 62771 - 63598 (-)
Type: TC
Location: 62771 - 63598 (-)
Gene ID: k141_43366_49
Type: TC
Location: 63598 - 64551 (-)
Type: TC
Location: 63598 - 64551 (-)
Gene ID: k141_43366_50
Type: TC
Location: 64638 - 66248 (-)
Type: TC
Location: 64638 - 66248 (-)
Gene ID: k141_43366_51
Type: pfam
Location: 66433 - 67716 (-)
Type: pfam
Location: 66433 - 67716 (-)
Gene ID: k141_43366_52
Type: TC
Location: 68167 - 69237 (-)
Type: TC
Location: 68167 - 69237 (-)
Gene ID: k141_43366_53
Type: TC
Location: 69241 - 70722 (-)
Type: TC
Location: 69241 - 70722 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_43366_46 | vegan > omnivore | 2.32588 | 0.01057 |
| k141_43366_47 | vegan > omnivore | 1.09754 | 0.01057 |
| k141_43366_48 | vegan > omnivore | 2.49886 | 0.01057 |
| k141_43366_49 | vegan > omnivore | 2.30277 | 0.01057 |
| k141_43366_50 | vegan > omnivore | 3.00718 | 0.01057 |