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Cluster: A6.CMAG_3_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A6_contig_1141 A6_contig_1141_1838 2248179 2249999 - GH13_31
TC A6_contig_1141 A6_contig_1141_1839 2250401 2251285 - 3.A.1.1.28
TC A6_contig_1141 A6_contig_1141_1840 2251324 2252259 - 3.A.1.1.28
TC A6_contig_1141 A6_contig_1141_1841 2252274 2253566 - 3.A.1.1.28
pfam A6_contig_1141 A6_contig_1141_1842 2253774 2254976 + ROK
CAZyme A6_contig_1141 A6_contig_1141_1843 2255163 2257475 - GH36
pfam A6_contig_1141 A6_contig_1141_1844 2257710 2258141 - dCMP_cyt_deam_1 | MafB19-deam
TC A6_contig_1141 A6_contig_1141_1845 2258269 2260341 + 2.A.36.3.2
Gene ID: A6_contig_1141_1838
Type: CAZyme
Location: 2248179 - 2249999 (-)
Gene ID: A6_contig_1141_1839
Type: TC
Location: 2250401 - 2251285 (-)
Gene ID: A6_contig_1141_1840
Type: TC
Location: 2251324 - 2252259 (-)
Gene ID: A6_contig_1141_1841
Type: TC
Location: 2252274 - 2253566 (-)
Gene ID: A6_contig_1141_1842
Type: pfam
Location: 2253774 - 2254976 (+)
Gene ID: A6_contig_1141_1843
Type: CAZyme
Location: 2255163 - 2257475 (-)
Gene ID: A6_contig_1141_1844
Type: pfam
Location: 2257710 - 2258141 (-)
Gene ID: A6_contig_1141_1845
Type: TC
Location: 2258269 - 2260341 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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