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Cluster: A6.CMAG_3_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A6_contig_1141 A6_contig_1141_1693 2051920 2053014 - 2.A.69.3.5
pfam A6_contig_1141 A6_contig_1141_1694 2053178 2054992 - TPP_enzyme_M | TPP_enzyme_C | TPP_enzyme_N
NULL(UNKNOWN) A6_contig_1141 A6_contig_1141_1695 2055205 2056140 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A6_contig_1141 A6_contig_1141_1696 2056410 2058698 + GH13_3
sulfatase A6_contig_1141 A6_contig_1141_1697 2058843 2059337 + S1_4
TC A6_contig_1141 A6_contig_1141_1698 2059896 2060462 + 2.A.107.1.2
Gene ID: A6_contig_1141_1693
Type: TC
Location: 2051920 - 2053014 (-)
Gene ID: A6_contig_1141_1694
Type: pfam
Location: 2053178 - 2054992 (-)
Gene ID: A6_contig_1141_1695
Type:
Location: 2055205 - 2056140 (-)
Gene ID: A6_contig_1141_1696
Type: CAZyme
Location: 2056410 - 2058698 (+)
Gene ID: A6_contig_1141_1697
Type: sulfatase
Location: 2058843 - 2059337 (+)
Gene ID: A6_contig_1141_1698
Type: TC
Location: 2059896 - 2060462 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A6_contig_1141_1693 vegan > omnivore 4.73831 0.00138
A6_contig_1141_1693 vegetarian > omnivore 2.86717 0.00565
A6_contig_1141_1694 vegan > omnivore 4.25368 0.00138
A6_contig_1141_1694 vegetarian > omnivore 1.68362 0.00565

🧭 Explore Read Mapping of CGC

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