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Cluster: A6.CMAG_3_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A6_contig_1141 A6_contig_1141_1497 1777797 1779245 - 2.A.2.2.3
TF A6_contig_1141 A6_contig_1141_1498 1779563 1780573 - LacI
TC A6_contig_1141 A6_contig_1141_1499 1780950 1783007 - 3.A.1.135.8
TC A6_contig_1141 A6_contig_1141_1500 1783021 1784832 - 3.A.1.135.5
TF A6_contig_1141 A6_contig_1141_1501 1784873 1785595 - MarR
CAZyme A6_contig_1141 A6_contig_1141_1502 1785749 1787995 - GH3
STP A6_contig_1141 A6_contig_1141_1503 1788252 1788830 + TetR_N
pfam A6_contig_1141 A6_contig_1141_1504 1788886 1790061 + Gly_kinase
TC A6_contig_1141 A6_contig_1141_1505 1790036 1791352 - 2.A.1.2.93
CAZyme A6_contig_1141 A6_contig_1141_1506 1791526 1794198 - CBM67 | GH78
Gene ID: A6_contig_1141_1497
Type: TC
Location: 1777797 - 1779245 (-)
Gene ID: A6_contig_1141_1498
Type: TF
Location: 1779563 - 1780573 (-)
Gene ID: A6_contig_1141_1499
Type: TC
Location: 1780950 - 1783007 (-)
Gene ID: A6_contig_1141_1500
Type: TC
Location: 1783021 - 1784832 (-)
Gene ID: A6_contig_1141_1501
Type: TF
Location: 1784873 - 1785595 (-)
Gene ID: A6_contig_1141_1502
Type: CAZyme
Location: 1785749 - 1787995 (-)
Gene ID: A6_contig_1141_1503
Type: STP
Location: 1788252 - 1788830 (+)
Gene ID: A6_contig_1141_1504
Type: pfam
Location: 1788886 - 1790061 (+)
Gene ID: A6_contig_1141_1505
Type: TC
Location: 1790036 - 1791352 (-)
Gene ID: A6_contig_1141_1506
Type: CAZyme
Location: 1791526 - 1794198 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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