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Cluster: A6.CMAG_3_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A6_contig_1141 A6_contig_1141_540 684366 685313 + 3.A.1.3.24
pfam A6_contig_1141 A6_contig_1141_541 685557 685988 + SBP_bac_3
TC A6_contig_1141 A6_contig_1141_542 686278 687207 + 3.A.1.3.24
TC A6_contig_1141 A6_contig_1141_543 687253 688236 + 3.A.1.3.24
TC A6_contig_1141 A6_contig_1141_544 688249 689043 + 3.A.1.3.24
STP A6_contig_1141 A6_contig_1141_545 689235 691127 + SIS | SIS
pfam A6_contig_1141 A6_contig_1141_546 691139 691891 + PseudoU_synth_2
TC A6_contig_1141 A6_contig_1141_547 692106 693398 + 2.A.23.4.1
TF A6_contig_1141 A6_contig_1141_548 693530 694537 - LacI
TC A6_contig_1141 A6_contig_1141_549 694774 695703 + 3.A.1.1.48
TC A6_contig_1141 A6_contig_1141_550 695761 696774 + 3.A.1.1.48
CAZyme A6_contig_1141 A6_contig_1141_551 696814 698883 + GH42
CAZyme A6_contig_1141 A6_contig_1141_552 698982 700541 - GH51_1
TC A6_contig_1141 A6_contig_1141_553 700820 702178 + 3.A.1.1.44
TC A6_contig_1141 A6_contig_1141_554 702393 703805 + 3.A.1.1.48
pfam A6_contig_1141 A6_contig_1141_555 703916 704689 - Pan_kinase
pfam A6_contig_1141 A6_contig_1141_556 704748 706031 - Flavoprotein | DFP
TC A6_contig_1141 A6_contig_1141_557 706233 707888 + 3.A.1.5.27
TC A6_contig_1141 A6_contig_1141_558 708078 709058 + 3.A.1.5.39
TC A6_contig_1141 A6_contig_1141_559 709055 709975 + 3.A.1.5.3
TC A6_contig_1141 A6_contig_1141_560 709972 710757 + 3.A.1.5.23
TC A6_contig_1141 A6_contig_1141_561 710769 711548 + 3.A.1.5.1
Gene ID: A6_contig_1141_540
Type: TC
Location: 684366 - 685313 (+)
Gene ID: A6_contig_1141_541
Type: pfam
Location: 685557 - 685988 (+)
Gene ID: A6_contig_1141_542
Type: TC
Location: 686278 - 687207 (+)
Gene ID: A6_contig_1141_543
Type: TC
Location: 687253 - 688236 (+)
Gene ID: A6_contig_1141_544
Type: TC
Location: 688249 - 689043 (+)
Gene ID: A6_contig_1141_545
Type: STP
Location: 689235 - 691127 (+)
Gene ID: A6_contig_1141_546
Type: pfam
Location: 691139 - 691891 (+)
Gene ID: A6_contig_1141_547
Type: TC
Location: 692106 - 693398 (+)
Gene ID: A6_contig_1141_548
Type: TF
Location: 693530 - 694537 (-)
Gene ID: A6_contig_1141_549
Type: TC
Location: 694774 - 695703 (+)
Gene ID: A6_contig_1141_550
Type: TC
Location: 695761 - 696774 (+)
Gene ID: A6_contig_1141_551
Type: CAZyme
Location: 696814 - 698883 (+)
Gene ID: A6_contig_1141_552
Type: CAZyme
Location: 698982 - 700541 (-)
Gene ID: A6_contig_1141_553
Type: TC
Location: 700820 - 702178 (+)
Gene ID: A6_contig_1141_554
Type: TC
Location: 702393 - 703805 (+)
Gene ID: A6_contig_1141_555
Type: pfam
Location: 703916 - 704689 (-)
Gene ID: A6_contig_1141_556
Type: pfam
Location: 704748 - 706031 (-)
Gene ID: A6_contig_1141_557
Type: TC
Location: 706233 - 707888 (+)
Gene ID: A6_contig_1141_558
Type: TC
Location: 708078 - 709058 (+)
Gene ID: A6_contig_1141_559
Type: TC
Location: 709055 - 709975 (+)
Gene ID: A6_contig_1141_560
Type: TC
Location: 709972 - 710757 (+)
Gene ID: A6_contig_1141_561
Type: TC
Location: 710769 - 711548 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A6_contig_1141_541 vegetarian > omnivore 1.24442 0.00565
A6_contig_1141_548 vegan > omnivore 15.57277 0.00138
A6_contig_1141_548 vegetarian > omnivore 15.41122 0.00565
A6_contig_1141_549 vegan > omnivore 1.10176 0.00138
A6_contig_1141_549 vegetarian > omnivore 1.34889 0.00565
A6_contig_1141_552 vegan > omnivore 2.95149 0.00138
A6_contig_1141_552 vegetarian > omnivore 2.65149 0.00565
A6_contig_1141_553 vegan > omnivore 15.33745 0.00138
A6_contig_1141_553 vegetarian > omnivore 15.96989 0.00565
A6_contig_1141_558 vegan > omnivore 1.00522 0.00138
A6_contig_1141_561 vegan > omnivore 1.91288 0.00138
A6_contig_1141_561 vegetarian > omnivore 1.34095 0.00565

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