Cluster: A54.CMAG_2_CGC30
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: A54.CMAG_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A54_contig_360 | A54_contig_360_2566 | 2769522 | 2770901 | + | 2.A.66.1.42 |
| CAZyme | A54_contig_360 | A54_contig_360_2567 | 2770945 | 2771949 | - | GT2 |
| CAZyme | A54_contig_360 | A54_contig_360_2568 | 2772122 | 2774935 | - | GH74 |
| peptidase | A54_contig_360 | A54_contig_360_2569 | 2775228 | 2776253 | + | M15.UPB |
| CAZyme | A54_contig_360 | A54_contig_360_2570 | 2776619 | 2778934 | + | GH5_4 |
| TC | A54_contig_360 | A54_contig_360_2571 | 2779302 | 2779991 | + | 3.A.2.1.5 |
Gene ID: A54_contig_360_2566
Type: TC
Location: 2769522 - 2770901 (+)
Type: TC
Location: 2769522 - 2770901 (+)
Gene ID: A54_contig_360_2567
Type: CAZyme
Location: 2770945 - 2771949 (-)
Type: CAZyme
Location: 2770945 - 2771949 (-)
Gene ID: A54_contig_360_2568
Type: CAZyme
Location: 2772122 - 2774935 (-)
Type: CAZyme
Location: 2772122 - 2774935 (-)
Gene ID: A54_contig_360_2569
Type: peptidase
Location: 2775228 - 2776253 (+)
Type: peptidase
Location: 2775228 - 2776253 (+)
Gene ID: A54_contig_360_2570
Type: CAZyme
Location: 2776619 - 2778934 (+)
Type: CAZyme
Location: 2776619 - 2778934 (+)
Gene ID: A54_contig_360_2571
Type: TC
Location: 2779302 - 2779991 (+)
Type: TC
Location: 2779302 - 2779991 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000437255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.