Cluster: A54.CMAG_2_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: A54.CMAG_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A54_contig_360 | A54_contig_360_70 | 81464 | 82150 | - | 9.B.100.1.1 |
| pfam | A54_contig_360 | A54_contig_360_71 | 82469 | 82792 | + | AraC_binding | Cupin_2 |
| TC | A54_contig_360 | A54_contig_360_72 | 82867 | 83877 | + | 8.A.5.1.3 |
| CAZyme | A54_contig_360 | A54_contig_360_73 | 84106 | 86523 | + | GT35 |
| CAZyme | A54_contig_360 | A54_contig_360_74 | 86610 | 88475 | + | GH13_39 |
Gene ID: A54_contig_360_70
Type: TC
Location: 81464 - 82150 (-)
Type: TC
Location: 81464 - 82150 (-)
Gene ID: A54_contig_360_71
Type: pfam
Location: 82469 - 82792 (+)
Type: pfam
Location: 82469 - 82792 (+)
Gene ID: A54_contig_360_72
Type: TC
Location: 82867 - 83877 (+)
Type: TC
Location: 82867 - 83877 (+)
Gene ID: A54_contig_360_73
Type: CAZyme
Location: 84106 - 86523 (+)
Type: CAZyme
Location: 84106 - 86523 (+)
Gene ID: A54_contig_360_74
Type: CAZyme
Location: 86610 - 88475 (+)
Type: CAZyme
Location: 86610 - 88475 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000437255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.