Cluster: A54.CMAG_2_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A54.CMAG_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A54_contig_360 | A54_contig_360_2028 | 2161873 | 2163474 | - | 2.A.36.6.11 |
| STP | A54_contig_360 | A54_contig_360_2029 | 2163486 | 2164091 | - | TetR_N |
| CAZyme | A54_contig_360 | A54_contig_360_2030 | 2164284 | 2166179 | + | GH13_9 |
| NULL(UNKNOWN) | A54_contig_360 | A54_contig_360_2031 | 2166251 | 2166793 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A54_contig_360 | A54_contig_360_2032 | 2167213 | 2167908 | + | 1.A.8.3.1 |
Gene ID: A54_contig_360_2028
Type: TC
Location: 2161873 - 2163474 (-)
Type: TC
Location: 2161873 - 2163474 (-)
Gene ID: A54_contig_360_2029
Type: STP
Location: 2163486 - 2164091 (-)
Type: STP
Location: 2163486 - 2164091 (-)
Gene ID: A54_contig_360_2030
Type: CAZyme
Location: 2164284 - 2166179 (+)
Type: CAZyme
Location: 2164284 - 2166179 (+)
Gene ID: A54_contig_360_2031
Type:
Location: 2166251 - 2166793 (-)
Type:
Location: 2166251 - 2166793 (-)
Gene ID: A54_contig_360_2032
Type: TC
Location: 2167213 - 2167908 (+)
Type: TC
Location: 2167213 - 2167908 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000437255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.