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Cluster: A54.CMAG_2_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A54_contig_360 A54_contig_360_1891 2011088 2012095 - GT2
CAZyme A54_contig_360 A54_contig_360_1892 2012085 2013692 - GT4
peptidase A54_contig_360 A54_contig_360_1893 2013689 2015131 - S08.UPA
TC A54_contig_360 A54_contig_360_1894 2015143 2016963 - 3.A.1.111.2
pfam A54_contig_360 A54_contig_360_1895 2016974 2018077 - MacB_PCD
pfam A54_contig_360 A54_contig_360_1896 2018074 2019156 - HlyD_3 | HlyD_D23
TC A54_contig_360 A54_contig_360_1897 2019165 2020016 - 3.A.1.1.20
TC A54_contig_360 A54_contig_360_1898 2020013 2020879 - 3.A.1.1.34
Gene ID: A54_contig_360_1891
Type: CAZyme
Location: 2011088 - 2012095 (-)
Gene ID: A54_contig_360_1892
Type: CAZyme
Location: 2012085 - 2013692 (-)
Gene ID: A54_contig_360_1893
Type: peptidase
Location: 2013689 - 2015131 (-)
Gene ID: A54_contig_360_1894
Type: TC
Location: 2015143 - 2016963 (-)
Gene ID: A54_contig_360_1895
Type: pfam
Location: 2016974 - 2018077 (-)
Gene ID: A54_contig_360_1896
Type: pfam
Location: 2018074 - 2019156 (-)
Gene ID: A54_contig_360_1897
Type: TC
Location: 2019165 - 2020016 (-)
Gene ID: A54_contig_360_1898
Type: TC
Location: 2020013 - 2020879 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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