Cluster: A54.CMAG_2_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A54.CMAG_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A54_contig_360 | A54_contig_360_1134 | 1151856 | 1152050 | + | 1.E.18.1.3 |
| pfam | A54_contig_360 | A54_contig_360_1135 | 1152065 | 1152340 | + | DUF6275 |
| pfam | A54_contig_360 | A54_contig_360_1136 | 1152344 | 1153081 | + | Amidase_2 |
| CAZyme | A54_contig_360 | A54_contig_360_1137 | 1153754 | 1155871 | + | GH16 | PL31 |
| TC | A54_contig_360 | A54_contig_360_1138 | 1156033 | 1158432 | - | 3.A.1.135.6 |
| TC | A54_contig_360 | A54_contig_360_1139 | 1158432 | 1160189 | - | 3.A.1.135.6 |
Gene ID: A54_contig_360_1134
Type: TC
Location: 1151856 - 1152050 (+)
Type: TC
Location: 1151856 - 1152050 (+)
Gene ID: A54_contig_360_1135
Type: pfam
Location: 1152065 - 1152340 (+)
Type: pfam
Location: 1152065 - 1152340 (+)
Gene ID: A54_contig_360_1136
Type: pfam
Location: 1152344 - 1153081 (+)
Type: pfam
Location: 1152344 - 1153081 (+)
Gene ID: A54_contig_360_1137
Type: CAZyme
Location: 1153754 - 1155871 (+)
Type: CAZyme
Location: 1153754 - 1155871 (+)
Gene ID: A54_contig_360_1138
Type: TC
Location: 1156033 - 1158432 (-)
Type: TC
Location: 1156033 - 1158432 (-)
Gene ID: A54_contig_360_1139
Type: TC
Location: 1158432 - 1160189 (-)
Type: TC
Location: 1158432 - 1160189 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000437255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.