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Cluster: A49.bin_13_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A49_contig_140 A49_contig_140_486 563355 565967 + CBM67 | GH78
pfam A49_contig_140 A49_contig_140_487 566636 567484 - AP_endonuc_2
CAZyme A49_contig_140 A49_contig_140_488 567488 569299 - CBM32 | GH43_28
CAZyme A49_contig_140 A49_contig_140_489 569304 571493 - GH2
pfam A49_contig_140 A49_contig_140_490 571572 573059 - MFS_2
CAZyme A49_contig_140 A49_contig_140_491 573303 574604 + GH1
TF A49_contig_140 A49_contig_140_492 574674 575873 + HTH_AraC | HTH_AraC
CAZyme A49_contig_140 A49_contig_140_493 575929 578370 - GH3
TC A49_contig_140 A49_contig_140_494 578974 580170 + 2.A.37.2.2
Gene ID: A49_contig_140_486
Type: CAZyme
Location: 563355 - 565967 (+)
Gene ID: A49_contig_140_487
Type: pfam
Location: 566636 - 567484 (-)
Gene ID: A49_contig_140_488
Type: CAZyme
Location: 567488 - 569299 (-)
Gene ID: A49_contig_140_489
Type: CAZyme
Location: 569304 - 571493 (-)
Gene ID: A49_contig_140_490
Type: pfam
Location: 571572 - 573059 (-)
Gene ID: A49_contig_140_491
Type: CAZyme
Location: 573303 - 574604 (+)
Gene ID: A49_contig_140_492
Type: TF
Location: 574674 - 575873 (+)
Gene ID: A49_contig_140_493
Type: CAZyme
Location: 575929 - 578370 (-)
Gene ID: A49_contig_140_494
Type: TC
Location: 578974 - 580170 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A49_contig_140_492 vegan > omnivore 1.24346 0.00699

🧭 Explore Read Mapping of CGC

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