dbCAN Logo

Cluster: A49.bin_13_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A49_contig_140 A49_contig_140_350 384287 386110 - PL33_1
TF A49_contig_140 A49_contig_140_351 386079 387362 - HTH_AraC | HTH_AraC
TC A49_contig_140 A49_contig_140_352 387376 389181 - 8.A.59.2.1
STP A49_contig_140 A49_contig_140_353 389560 390900 + SBP_bac_1
TC A49_contig_140 A49_contig_140_354 391014 391931 + 3.A.1.1.20
TC A49_contig_140 A49_contig_140_355 391950 392813 + 3.A.1.1.36
CAZyme A49_contig_140 A49_contig_140_356 393091 394254 + GH88
CAZyme A49_contig_140 A49_contig_140_357 394254 395966 + GH154
CAZyme A49_contig_140 A49_contig_140_358 395995 397749 + GH2
Gene ID: A49_contig_140_350
Type: CAZyme
Location: 384287 - 386110 (-)
Gene ID: A49_contig_140_351
Type: TF
Location: 386079 - 387362 (-)
Gene ID: A49_contig_140_352
Type: TC
Location: 387376 - 389181 (-)
Gene ID: A49_contig_140_353
Type: STP
Location: 389560 - 390900 (+)
Gene ID: A49_contig_140_354
Type: TC
Location: 391014 - 391931 (+)
Gene ID: A49_contig_140_355
Type: TC
Location: 391950 - 392813 (+)
Gene ID: A49_contig_140_356
Type: CAZyme
Location: 393091 - 394254 (+)
Gene ID: A49_contig_140_357
Type: CAZyme
Location: 394254 - 395966 (+)
Gene ID: A49_contig_140_358
Type: CAZyme
Location: 395995 - 397749 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List