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Cluster: A49.bin_13_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A49_contig_3606 A49_contig_3606_38 38789 40201 + 2.A.66.1.32
pfam A49_contig_3606 A49_contig_3606_39 40376 40846 + Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
pfam A49_contig_3606 A49_contig_3606_40 40972 42300 - MatE | MatE
CAZyme A49_contig_3606 A49_contig_3606_41 42805 45189 + GH2
CAZyme A49_contig_3606 A49_contig_3606_42 45578 47560 + GH42
TF A49_contig_3606 A49_contig_3606_43 47699 48730 + LacI
pfam A49_contig_3606 A49_contig_3606_44 49092 50396 + SBP_bac_8
TC A49_contig_3606 A49_contig_3606_45 50479 51924 + 3.A.1.1.27
TC A49_contig_3606 A49_contig_3606_46 51921 52823 + 3.A.1.1.27
Gene ID: A49_contig_3606_38
Type: TC
Location: 38789 - 40201 (+)
Gene ID: A49_contig_3606_39
Type: pfam
Location: 40376 - 40846 (+)
Gene ID: A49_contig_3606_40
Type: pfam
Location: 40972 - 42300 (-)
Gene ID: A49_contig_3606_41
Type: CAZyme
Location: 42805 - 45189 (+)
Gene ID: A49_contig_3606_42
Type: CAZyme
Location: 45578 - 47560 (+)
Gene ID: A49_contig_3606_43
Type: TF
Location: 47699 - 48730 (+)
Gene ID: A49_contig_3606_44
Type: pfam
Location: 49092 - 50396 (+)
Gene ID: A49_contig_3606_45
Type: TC
Location: 50479 - 51924 (+)
Gene ID: A49_contig_3606_46
Type: TC
Location: 51921 - 52823 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A49_contig_3606_40 vegetarian > omnivore 2.05672 0.00567
A49_contig_3606_41 vegetarian > omnivore 1.07926 0.00567

🧭 Explore Read Mapping of CGC

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