Cluster: A49.bin_13_CGC41
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate: beta-mannan
- Genome ID: A49.bin_13
- CGC Family ID: CGCFAM_00066
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A49_contig_3523 | A49_contig_3523_12 | 11070 | 12521 | - | GH1 |
| pfam | A49_contig_3523 | A49_contig_3523_13 | 12544 | 12942 | - | PTS_IIA |
| TC | A49_contig_3523 | A49_contig_3523_14 | 13108 | 14358 | - | 4.A.3.2.8 |
Gene ID: A49_contig_3523_12
Type: CAZyme
Location: 11070 - 12521 (-)
Type: CAZyme
Location: 11070 - 12521 (-)
Gene ID: A49_contig_3523_13
Type: pfam
Location: 12544 - 12942 (-)
Type: pfam
Location: 12544 - 12942 (-)
Gene ID: A49_contig_3523_14
Type: TC
Location: 13108 - 14358 (-)
Type: TC
Location: 13108 - 14358 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.