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Cluster: A49.bin_13_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A49_contig_140 A49_contig_140_2553 2980351 2982129 - 8.A.59.2.1
TC A49_contig_140 A49_contig_140_2554 2982343 2983746 + 3.A.1.1.18
TC A49_contig_140 A49_contig_140_2555 2983844 2984758 + 3.A.1.1.20
TC A49_contig_140 A49_contig_140_2556 2984760 2985614 + 3.A.1.1.18
CAZyme A49_contig_140 A49_contig_140_2557 2985644 2987809 + GH95
CAZyme A49_contig_140 A49_contig_140_2558 2987806 2989974 + GH112
CAZyme A49_contig_140 A49_contig_140_2559 2989979 2991391 + GH29
Gene ID: A49_contig_140_2553
Type: TC
Location: 2980351 - 2982129 (-)
Gene ID: A49_contig_140_2554
Type: TC
Location: 2982343 - 2983746 (+)
Gene ID: A49_contig_140_2555
Type: TC
Location: 2983844 - 2984758 (+)
Gene ID: A49_contig_140_2556
Type: TC
Location: 2984760 - 2985614 (+)
Gene ID: A49_contig_140_2557
Type: CAZyme
Location: 2985644 - 2987809 (+)
Gene ID: A49_contig_140_2558
Type: CAZyme
Location: 2987806 - 2989974 (+)
Gene ID: A49_contig_140_2559
Type: CAZyme
Location: 2989979 - 2991391 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A49_contig_140_2554 vegan > omnivore 1.10269 0.00699

🧭 Explore Read Mapping of CGC

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