Cluster: A49.bin_13_CGC36
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A49.bin_13
- CGC Family ID: CGCFAM_00764
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A49_contig_140 | A49_contig_140_2179 | 2564591 | 2565166 | + | 4.F.1.1.7 |
| NULL(UNKNOWN) | A49_contig_140 | A49_contig_140_2180 | 2565296 | 2567239 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | A49_contig_140 | A49_contig_140_2181 | 2567313 | 2568710 | + | tRNA-synt_1e | DALR_2 | tRNA-synt_1g | tRNA-synt_1g | CysS_C |
| CAZyme | A49_contig_140 | A49_contig_140_2182 | 2569016 | 2571928 | + | GT39 |
Gene ID: A49_contig_140_2179
Type: TC
Location: 2564591 - 2565166 (+)
Type: TC
Location: 2564591 - 2565166 (+)
Gene ID: A49_contig_140_2180
Type:
Location: 2565296 - 2567239 (+)
Type:
Location: 2565296 - 2567239 (+)
Gene ID: A49_contig_140_2181
Type: pfam
Location: 2567313 - 2568710 (+)
Type: pfam
Location: 2567313 - 2568710 (+)
Gene ID: A49_contig_140_2182
Type: CAZyme
Location: 2569016 - 2571928 (+)
Type: CAZyme
Location: 2569016 - 2571928 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.