Cluster: A49.bin_13_CGC33
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A49.bin_13
- CGC Family ID: CGCFAM_00451
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A49_contig_140 | A49_contig_140_2070 | 2435164 | 2436153 | - | GT2 |
| NULL(UNKNOWN) | A49_contig_140 | A49_contig_140_2071 | 2436163 | 2436597 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | A49_contig_140 | A49_contig_140_2072 | 2436609 | 2437043 | - | MarR |
| TC | A49_contig_140 | A49_contig_140_2073 | 2437665 | 2438627 | + | 2.A.19.5.2 |
Gene ID: A49_contig_140_2070
Type: CAZyme
Location: 2435164 - 2436153 (-)
Type: CAZyme
Location: 2435164 - 2436153 (-)
Gene ID: A49_contig_140_2071
Type:
Location: 2436163 - 2436597 (-)
Type:
Location: 2436163 - 2436597 (-)
Gene ID: A49_contig_140_2072
Type: TF
Location: 2436609 - 2437043 (-)
Type: TF
Location: 2436609 - 2437043 (-)
Gene ID: A49_contig_140_2073
Type: TC
Location: 2437665 - 2438627 (+)
Type: TC
Location: 2437665 - 2438627 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.