Cluster: A49.bin_13_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: A49.bin_13
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A49_contig_140 | A49_contig_140_1924 | 2272334 | 2273614 | - | GH136 |
| NULL(UNKNOWN) | A49_contig_140 | A49_contig_140_1925 | 2273574 | 2274038 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A49_contig_140 | A49_contig_140_1926 | 2274038 | 2274844 | - | 3.A.1.1.4 |
| TC | A49_contig_140 | A49_contig_140_1927 | 2274837 | 2275718 | - | 3.A.1.1.4 |
| TC | A49_contig_140 | A49_contig_140_1928 | 2275840 | 2277201 | - | 3.A.1.1.4 |
| CAZyme | A49_contig_140 | A49_contig_140_1929 | 2277283 | 2279442 | - | GH112 |
Gene ID: A49_contig_140_1924
Type: CAZyme
Location: 2272334 - 2273614 (-)
Type: CAZyme
Location: 2272334 - 2273614 (-)
Gene ID: A49_contig_140_1925
Type:
Location: 2273574 - 2274038 (-)
Type:
Location: 2273574 - 2274038 (-)
Gene ID: A49_contig_140_1926
Type: TC
Location: 2274038 - 2274844 (-)
Type: TC
Location: 2274038 - 2274844 (-)
Gene ID: A49_contig_140_1927
Type: TC
Location: 2274837 - 2275718 (-)
Type: TC
Location: 2274837 - 2275718 (-)
Gene ID: A49_contig_140_1928
Type: TC
Location: 2275840 - 2277201 (-)
Type: TC
Location: 2275840 - 2277201 (-)
Gene ID: A49_contig_140_1929
Type: CAZyme
Location: 2277283 - 2279442 (-)
Type: CAZyme
Location: 2277283 - 2279442 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.