Cluster: A49.bin_13_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A49.bin_13
- CGC Family ID: CGCFAM_00679
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A49_contig_140 | A49_contig_140_192 | 216303 | 217271 | - | GT100 |
| TC | A49_contig_140 | A49_contig_140_193 | 217275 | 218552 | - | 3.A.1.103.5 |
| TC | A49_contig_140 | A49_contig_140_194 | 218570 | 219448 | - | 3.A.1.103.5 |
| TC | A49_contig_140 | A49_contig_140_195 | 219683 | 220399 | - | 3.A.1.3.25 |
| TC | A49_contig_140 | A49_contig_140_196 | 220386 | 221153 | - | 3.A.1.3.20 |
| TC | A49_contig_140 | A49_contig_140_197 | 221380 | 222228 | - | 3.A.1.3.27 |
Gene ID: A49_contig_140_192
Type: CAZyme
Location: 216303 - 217271 (-)
Type: CAZyme
Location: 216303 - 217271 (-)
Gene ID: A49_contig_140_193
Type: TC
Location: 217275 - 218552 (-)
Type: TC
Location: 217275 - 218552 (-)
Gene ID: A49_contig_140_194
Type: TC
Location: 218570 - 219448 (-)
Type: TC
Location: 218570 - 219448 (-)
Gene ID: A49_contig_140_195
Type: TC
Location: 219683 - 220399 (-)
Type: TC
Location: 219683 - 220399 (-)
Gene ID: A49_contig_140_196
Type: TC
Location: 220386 - 221153 (-)
Type: TC
Location: 220386 - 221153 (-)
Gene ID: A49_contig_140_197
Type: TC
Location: 221380 - 222228 (-)
Type: TC
Location: 221380 - 222228 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.