Cluster: A49.bin_13_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A49.bin_13
- CGC Family ID: CGCFAM_00678
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A49_contig_140 | A49_contig_140_1657 | 1911509 | 1912855 | + | 2.A.25.1.4 |
| CAZyme | A49_contig_140 | A49_contig_140_1658 | 1914186 | 1915313 | - | CE9 |
| sulfatase | A49_contig_140 | A49_contig_140_1659 | 1915333 | 1916061 | - | S1_9 |
| TC | A49_contig_140 | A49_contig_140_1660 | 1916284 | 1917759 | - | 4.A.1.1.7 |
Gene ID: A49_contig_140_1657
Type: TC
Location: 1911509 - 1912855 (+)
Type: TC
Location: 1911509 - 1912855 (+)
Gene ID: A49_contig_140_1658
Type: CAZyme
Location: 1914186 - 1915313 (-)
Type: CAZyme
Location: 1914186 - 1915313 (-)
Gene ID: A49_contig_140_1659
Type: sulfatase
Location: 1915333 - 1916061 (-)
Type: sulfatase
Location: 1915333 - 1916061 (-)
Gene ID: A49_contig_140_1660
Type: TC
Location: 1916284 - 1917759 (-)
Type: TC
Location: 1916284 - 1917759 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.