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Cluster: A49.bin_13_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A49_contig_140 A49_contig_140_1536 1754390 1755220 - GT6
TC A49_contig_140 A49_contig_140_1537 1755213 1756493 - 3.A.1.103.5
TC A49_contig_140 A49_contig_140_1538 1756506 1757363 - 3.A.1.103.5
CAZyme A49_contig_140 A49_contig_140_1539 1757376 1758344 - GT2
CAZyme A49_contig_140 A49_contig_140_1540 1758491 1759465 - GT2
pfam A49_contig_140 A49_contig_140_1541 1759475 1760569 - ATPgrasp_TupA
CAZyme A49_contig_140 A49_contig_140_1542 1760573 1761637 - GT2
Gene ID: A49_contig_140_1536
Type: CAZyme
Location: 1754390 - 1755220 (-)
Gene ID: A49_contig_140_1537
Type: TC
Location: 1755213 - 1756493 (-)
Gene ID: A49_contig_140_1538
Type: TC
Location: 1756506 - 1757363 (-)
Gene ID: A49_contig_140_1539
Type: CAZyme
Location: 1757376 - 1758344 (-)
Gene ID: A49_contig_140_1540
Type: CAZyme
Location: 1758491 - 1759465 (-)
Gene ID: A49_contig_140_1541
Type: pfam
Location: 1759475 - 1760569 (-)
Gene ID: A49_contig_140_1542
Type: CAZyme
Location: 1760573 - 1761637 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A49_contig_140_1536 vegetarian > omnivore 1.87873 0.00360

🧭 Explore Read Mapping of CGC

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