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Cluster: A49.bin_13_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A49_contig_140 A49_contig_140_1198 1355778 1356836 + 9.B.18.2.1
pfam A49_contig_140 A49_contig_140_1199 1356833 1358032 + Epimerase | Polysacc_synt_C
pfam A49_contig_140 A49_contig_140_1200 1358242 1359417 + Epimerase_2
CAZyme A49_contig_140 A49_contig_140_1201 1359439 1360656 + GT4
CAZyme A49_contig_140 A49_contig_140_1202 1361013 1361732 + GT2
pfam A49_contig_140 A49_contig_140_1203 1361729 1362082 + DUF2304
TC A49_contig_140 A49_contig_140_1204 1362101 1363603 + 2.A.50.2.1
Gene ID: A49_contig_140_1198
Type: TC
Location: 1355778 - 1356836 (+)
Gene ID: A49_contig_140_1199
Type: pfam
Location: 1356833 - 1358032 (+)
Gene ID: A49_contig_140_1200
Type: pfam
Location: 1358242 - 1359417 (+)
Gene ID: A49_contig_140_1201
Type: CAZyme
Location: 1359439 - 1360656 (+)
Gene ID: A49_contig_140_1202
Type: CAZyme
Location: 1361013 - 1361732 (+)
Gene ID: A49_contig_140_1203
Type: pfam
Location: 1361729 - 1362082 (+)
Gene ID: A49_contig_140_1204
Type: TC
Location: 1362101 - 1363603 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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