Cluster: A49.bin_13_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A49.bin_13
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A49_contig_140 | A49_contig_140_559 | 645465 | 646028 | + | 3.A.1.17.12 |
| pfam | A49_contig_140 | A49_contig_140_560 | 646229 | 647308 | - | Radical_SAM |
| peptidase | A49_contig_140 | A49_contig_140_561 | 647317 | 648126 | - | S09.UNW |
| CAZyme | A49_contig_140 | A49_contig_140_562 | 648123 | 649094 | - | CE7 |
| TC | A49_contig_140 | A49_contig_140_563 | 649263 | 649982 | + | 1.A.14.2.2 |
Gene ID: A49_contig_140_559
Type: TC
Location: 645465 - 646028 (+)
Type: TC
Location: 645465 - 646028 (+)
Gene ID: A49_contig_140_560
Type: pfam
Location: 646229 - 647308 (-)
Type: pfam
Location: 646229 - 647308 (-)
Gene ID: A49_contig_140_561
Type: peptidase
Location: 647317 - 648126 (-)
Type: peptidase
Location: 647317 - 648126 (-)
Gene ID: A49_contig_140_562
Type: CAZyme
Location: 648123 - 649094 (-)
Type: CAZyme
Location: 648123 - 649094 (-)
Gene ID: A49_contig_140_563
Type: TC
Location: 649263 - 649982 (+)
Type: TC
Location: 649263 - 649982 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A49_contig_140_561 | vegetarian > omnivore | 1.12502 | 0.00567 |