Cluster: A49.bin_13_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A49.bin_13
- CGC Family ID: CGCFAM_00763
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A49_contig_140 | A49_contig_140_15 | 17792 | 19285 | + | GH28 |
| TF | A49_contig_140 | A49_contig_140_16 | 19444 | 19950 | + | MarR |
| TC | A49_contig_140 | A49_contig_140_17 | 19934 | 22135 | + | 3.A.1.135.6 |
| TC | A49_contig_140 | A49_contig_140_18 | 22137 | 23948 | + | 3.A.1.135.6 |
Gene ID: A49_contig_140_15
Type: CAZyme
Location: 17792 - 19285 (+)
Type: CAZyme
Location: 17792 - 19285 (+)
Gene ID: A49_contig_140_16
Type: TF
Location: 19444 - 19950 (+)
Type: TF
Location: 19444 - 19950 (+)
Gene ID: A49_contig_140_17
Type: TC
Location: 19934 - 22135 (+)
Type: TC
Location: 19934 - 22135 (+)
Gene ID: A49_contig_140_18
Type: TC
Location: 22137 - 23948 (+)
Type: TC
Location: 22137 - 23948 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.